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Office of Undergraduate Research Home » 2024 Undergraduate Research Symposium Schedules

Found 7 projects

Poster Presentation 3

2:15 PM to 3:30 PM
Critical and Creative (Un)Mapping of the Capitol Hill Organized Protest (CHOP)
Presenters
  • Mykenzie Hirata, Senior, Geography: Data Science
  • Alex Kirchmeier, Senior, Geography: Data Science
  • Kiley Madelyn (Kiley) Foster, Senior, Environmental Studies
  • Sahil Bains, Senior, Geography: Data Science
Mentors
  • Jin-Kyu Jung, Geography, Univeristy of Washington Bothell
  • Liz Peng (lp36@uw.edu)
Session
    Poster Session 3
  • MGH Commons West
  • Easel #3
  • 2:15 PM to 3:30 PM

  • Other students mentored by Jin-Kyu Jung (1)
Critical and Creative (Un)Mapping of the Capitol Hill Organized Protest (CHOP)close

The project aims to explore and experiment, through critical and creative geovisualization practice and pedagogy, innovative ways to embody, imagine, and represent the more nuanced social and spatial understanding of the Capitol Hill Organized Protest (CHOP). Specifically, we plan to implement qualitative forms of representation and analysis into the CHOP digital geographical archive as new data and layers. It involves analyzing individual graffiti, the messages, and patterns of speech, memories shared in the interactive map, as well as data collected from the field visit and interviews/conversations with the participants of the CHOP through the transformation of various modes of data and analysis that value representation in different ways. It draws on disruptive approaches from black digital geographies and critical and socially-relevant GIS to challenge how meaning is made from digital data. Yet, the project’s objective is not just to map these data and representation in/of the CHOP, but the opposite—remaking and even re-imagining through a process of humanistic sense of place-making. We engaged in multiple conversations with both direct and indirect stakeholders, fostering a comprehensive understanding of the diverse perspectives surrounding the CHOP. Direct stakeholders included individuals who had lived and experienced similar conflicts in Seattle’s history with the WTO protests, which provided invaluable insights that allowed for direct comparisons to the circumstances within the CHOP. Indirect stakeholders include individuals who contributed greatly by offering their perspectives on approaching potential challenges of the project. We put forward critical and creative geovisual processes that can draw connections between local community-based participatory and policy work, and how these diverse evolutions of critical GIS and geovisualization tell a more complex and nuanced story about the CHOP by relating to social, political, and cultural practices and as a way of engaged knowledge production.


Exploring the Relationship of Poverty, Income, and Education (PIE): A Community Mapping Analysis of Poverty Percentage, Income Level, and Education Outcomes in Seattle Public Schools (SPS)
Presenters
  • Sakura Tabuchi, Senior, Mathematical Thinking and Visualization
  • Sandra Awuah, Junior, Mathematical Thinking and Visualization
  • Minh Thuong (Minh) Trinh, Junior, Global Studies (Bothell), Mathematical Thinking and Visualization
  • Aaron Chau, Senior, Media & Communication Studies (Bothell)
  • Keegan Catlin
Mentor
  • Jin-Kyu Jung, Geography, Interdisciplinary Arts & Sciences (Bothell Campus), Univeristy of Washington Bothell
Session
    Poster Session 3
  • MGH Commons West
  • Easel #4
  • 2:15 PM to 3:30 PM

  • Other students mentored by Jin-Kyu Jung (1)
Exploring the Relationship of Poverty, Income, and Education (PIE): A Community Mapping Analysis of Poverty Percentage, Income Level, and Education Outcomes in Seattle Public Schools (SPS)close

Though Seattle’s reputation is for economic and technological prosperity, some Seattle high schools do not nurture students with the academic and professional rigor needed to partake in their local economy. This project examines the relationship between poverty and income in the City of Seattle and secondary education outcomes in Seattle Public Schools (SPS). The project puts forward the concept and practice of community mapping and GIS (Geographic Information Systems) for representation and visualization. Conducting a mixed-methods research using both qualitative and secondary research analyses, we uncover education narratives and outcomes in SPS while considering socioeconomic and political influences. SPS and state government online databases provided relevant information such as school graduation rate, college-readiness index, census tract poverty percentage, average annual income, and income inequality. We also conducted an online survey on SPS counselors, inquiring about their perception and input behind local socioeconomic contributions to the SPS curriculum and school life. In visualizing our research data, we utilized ArcGIS Pro, sectioning Seattle by SPS school zones and census tract, organizing our data by poverty percentage and income level through bivariate analysis, and juxtaposing them with education outcomes in SPS. Altogether, employing a social community investigation in conjunction with our mapping process allows for a deeper geospatial analysis that can be used as a tool to highlight socio-economic issues. In light of the socio-economic problems in Seattle, SPS counselors infer that other variables such as rich community sentiment, domestic and scholastic support, extracurricular involvement, and an overall meaningful life balance can contribute to successful education. Though our work establishes the relationship between high poverty percentage, low income, and poor education outcomes, we found that specific education metrics such as graduation rates do not necessarily entail success beyond secondary education. We proposed to use other metrics, such as the college readiness index, to infer education outcomes more accurately.


Protective Roles of Hydrogen Sulfide and Methanethiol Against Cellular Stress in Hepatic Cells and Ventricular Cardiomyocytes
Presenter
  • Eileen Hoeun (Eileen) Son, Senior, Biochemistry
Mentors
  • Rheem Totah, Medicinal Chemistry
  • Taeyoon Jung, Medicinal Chemistry
Session
    Poster Session 3
  • HUB Lyceum
  • Easel #115
  • 2:15 PM to 3:30 PM

  • Other Medicinal Chemistry mentored projects (7)
  • Other students mentored by Rheem Totah (1)
Protective Roles of Hydrogen Sulfide and Methanethiol Against Cellular Stress in Hepatic Cells and Ventricular Cardiomyocytesclose

Traditionally known for its toxicity, hydrogen sulfide (H2S) also possesses physiological roles as an endogenous gaseous signaling molecule in multiple biological processes. Previous research has demonstrated changes in levels of H2S-producing enzymes during oxidative stress, hypoxia, and inflammation in various tissues including the liver and heart. H2S protects cells from cytotoxicity in part by promoting the synthesis of glutathione, neutralizing reactive oxygen species, and inhibiting apoptosis signaling pathways. Thiol methyltransferases TMT1A and TMT1B can methylate endogenous H2S to methanethiol. TMT1B has been shown to have a potential role in mediating the toxic effects of methanethiol. Gene silencing of TMT1B was found to significantly alleviate the observed cytotoxicity induced by methanethiol in human bronchial epithelial cells (16HBE). Methanethiol may induce harm to human respiratory tract cells, and understanding the mechanisms involved, including the role of TMT1B, could potentially lead to insights for mitigating these harmful effects. Doxorubicin (Dox) is a widely used chemotherapy drug for the treatment of various cancers but can induce oxidative stress in cells. In my preliminary experiments, I assessed the cell viability of HepG2 liver cells that were supplemented with various concentrations of NaSH (H2S donor) and sodium methanethiolate (NaSMe, MeSH donor), followed by Dox treatment. Supplementing the cells with H2S significantly increased cell viability in the presence of doxorubicin, while the methanethiol had no effect. The goal of my project is to identify H2S-dependent protective pathways during cellular stress in HepG2 versus cardiomyocytes. My preliminary data indicates that both H2S and its metabolite, methanethiol, may alter cellular responses following treatment of exogenous compounds that induce cellular stress such as CoCl2, hydrogen peroxide and Dox. My goal is to pinpoint genes altered during the stress response. This understanding of H2S-dependent pathways may pave the way for designing novel therapeutics that maintain or enhance H2S levels.


Role of Activin A in Activating Innate Immune Cells and Promoting Chemotaxis in Acute Pancreatitis 
Presenter
  • Wenxuan Cheng, Senior, Biology (Molecular, Cellular & Developmental) Levinson Emerging Scholar, Mary Gates Scholar, UW Honors Program
Mentors
  • Barbara Jung, Medicine
  • Mark Wiley, Medicine
Session
    Poster Session 3
  • HUB Lyceum
  • Easel #133
  • 2:15 PM to 3:30 PM

  • Other students mentored by Barbara Jung (1)
  • Other students mentored by Mark Wiley (1)
Role of Activin A in Activating Innate Immune Cells and Promoting Chemotaxis in Acute Pancreatitis close

Acute pancreatitis is an abrupt and painful inflammation of the pancreas that is often associated with serious complications and high mortality rates. Current diagnostic and therapeutic options remain limited, underscoring the need for novel strategies based on the underlying mechanisms of the disease. Our previous research suggests a key role for activin A, a member of the Transforming Growth Factor β (TGF-β) superfamily, in modulating inflammatory responses. Notably, activin A appears to trigger the c-Jun N-terminal kinase (JNK) pathway, a crucial member in macrophage activation during inflammatory diseases. This study aims to explore the role of activin A and the pJNK signaling pathway in macrophages during the pathogenesis of acute pancreatitis. Our investigation involves cell culture experiments using the RAW264.7 macrophage cell line, qPCR and Western blot analysis to identify protein alterations in activin-stimulated macrophages, and transwell migration assays to examine macrophage’s migratory ability toward chemoattractant after activin stimulation. We predict that activin A-stimulated macrophages would have increased JNK activation, increasing macrophage infiltration in inflamed tissues and polarization toward the pro-inflammatory subtype, potentially exacerbating the severe inflammatory response of acute pancreatitis. Our study is expected to reveal novel pathogenic mechanisms of acute pancreatitis and pave the way for the development of more effective diagnostic and therapeutic strategies for this disease.


Poster Presentation 4

3:45 PM to 5:00 PM
Targeted Drug Delivery to Modulate Inflammation in the Injured Neonatal Brain
Presenter
  • Sofia Dahlgren, Junior, Chemical Engineering
Mentors
  • Elizabeth Nance, Chemical Engineering
  • Ruby Jin, Chemical Engineering
Session
    Poster Session 4
  • CSE
  • Easel #157
  • 3:45 PM to 5:00 PM

  • Other Chemical Engineering mentored projects (16)
  • Other students mentored by Elizabeth Nance (4)
Targeted Drug Delivery to Modulate Inflammation in the Injured Neonatal Brainclose

Hypoxic-ischemic encephalopathy (HIE), resulting from loss of oxygen and blood flow to the brain, remains a leading cause of death and disability in infants with no cure. Following the onset of HIE, inflammation and oxidative stress can drive ongoing injury in the newborn brain. Microglial and neuronal cell populations are promising therapeutic targets. However, drug delivery to the brain and into disease-mediating cells remains a challenge. Our prior work has demonstrated the ability of poly(ethylene glycol)-poly(lactic-co-glycolic acid) (PEG-PLGA) nanotherapeutics to overcome biological barriers in the brain. PLGA-PEG nanoparticles formulated with polysorbate 80 (P80) can further localize to microglia and neurons after systemic administration. We aimed to develop PLGA-PEG nanoparticles for cell-specific delivery of N-acetylcysteine (NAC), an anti-inflammatory agent, in neonatal hypoxia-ischemia (HI). We first varied formulation parameters to optimize a NAC-loaded PLGA-PEG/P80 nanoparticle platform. PLGA-PEG composition and surface-active agent concentration tuned particle size distribution, surface charge, and encapsulation efficiency characterized by dynamic light scattering and high-performance liquid chromatography. Leveraging an ex vivo rat brain slice model of neonatal HI, we investigated cellular uptake of fluorescently labeled nanoparticles. We observed particle localization in microglia and neurons, demonstrating cell-targeting ability following topical application to brain tissue. This work informs optimal particle design for delivering a therapeutically relevant dose of NAC, which is currently limited in clinical application due to unfavorable pharmacokinetic properties. Future experiments could apply the NAC nanoparticle platform using in vivo models to evaluate therapeutic potential for newborns with HIE.


Mapping the Protein Interactome of the ER Resident Kinase TAOK2α
Presenter
  • Alison Michelle (Alison) Blencowe, Senior, Biology (Molecular, Cellular & Developmental)
Mentors
  • Smita Yadav, Pharmacology
  • Sujin Byeon, Neuroscience, Pharmacology, Graduate Program in Neuroscience
Session
    Poster Session 4
  • HUB Lyceum
  • Easel #110
  • 3:45 PM to 5:00 PM

  • Other Pharmacology mentored projects (19)
  • Other students mentored by Smita Yadav (2)
Mapping the Protein Interactome of the ER Resident Kinase TAOK2αclose

Thousand-and-one amino acid kinase 2 (TAOK2) is an autism-associated serine-threonine kinase that has been shown to be important for several aspects of neurodevelopment, including axon elongation, dendritic branching, and spine formation. TAOK2α is localized to the endoplasmic reticulum (ER) and mediates the tethering of the ER to the microtubule cytoskeleton. Interestingly, it is found in specific subdomains within the ER membrane, however, the identity and function of these distinct ER subdomains remain unknown. Further, during mitosis, TAOK2α is found at the points of contact between ER and mitotic spindles including mitotic spindle poles or centrosomes. While it is clear that TAOK2 plays an important role in regulating ER dynamics during cell division, the molecular mechanisms mediating these functions and specific localization of TAOK2 are yet to be determined. To better understand the molecular function of TAOK2, I performed an immunoprecipitation (IP) mass spectrometry in human induced pluripotent stem cell (iPSC)-derived neural progenitor cells (NPCs) and identified 31 potential interactors of TAOK2α. These interactors are implicated in several important cellular processes such as mitosis, RNA splicing, transcription and translation, as well as lipid metabolism. I will further shortlist the interactors by validating the interaction through immunocytochemistry. I will examine changes in cell cycle in wildtype and TAOK2 knockout NPCs through live cell confocal microscopy. Additionally, given that some of the interactors regulate lipid homeostasis, I performed lipidomics to study how the absence of TAOK2 affects lipid metabolism. Together, these experiments will reveal fundamental insights on TAOK2 and the unique link between dysfunction in organelles and autism.


“Accidental Archivists:” YouTube Gameplay Content and Game Preservation
Presenter
  • Drew Favors, Senior, Informatics (Human-Computer Interaction), Cinema and Media Studies
Mentor
  • Jin Ha Lee, Information School
Session
    Poster Session 4
  • CSE
  • Easel #174
  • 3:45 PM to 5:00 PM

  • Other Information School mentored projects (5)
“Accidental Archivists:” YouTube Gameplay Content and Game Preservationclose

Gaming is a well-defined experience of play, but it has not been thoroughly explored in media studies. Although methods to preserve games focus on console games or emulation, they lack focus on preserving the gaming experience as a whole, especially the context of play. Preserving the user’s engagement with a game beyond playing the game itself is limited because many of these experiences occur outside of the game world. Cultural institutions such as libraries, museums, and archives cannot preserve every game and gameplay experience due to time and financial constraints. Scholars have suggested using player-generated content such as walkthroughs and let’s plays as a preservation solution. These videos are already available online, making it unnecessary for cultural heritage institutions to create them from scratch. The question is: how can we use player-generated gameplay content to assist in the preservation of games? To answer this, a content analysis was conducted. 31 YouTube channels were randomly sampled, with 10 videos from each channel. The aim of this study is to gain a better understanding of online gaming communities and ludic activities and their implications for future frameworks of knowledge organization. With gameplay content on YouTube growing rapidly, it is important to conduct this research before the rate of new content becomes too overwhelming to keep up with.


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