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Office of Undergraduate Research Home » 2021 Undergraduate Research Symposium Schedules

Found 4 projects

Lightning Talk Presentation 1

9:00 AM to 9:55 AM
The Impact of Ndufs4 Knockout Mutations on Neuronal Excitability in a Mouse Model of Ndufs4 Related Leigh Syndrome
Presenter
  • Rose Wang, Senior, Neuroscience, Biochemistry UW Honors Program
Mentor
  • Franck Kalume, Neurological Surgery, UW/ Seattle Children's
Session
    Session T-1G: Neuroscience 1
  • 9:00 AM to 9:55 AM

  • Other students mentored by Franck Kalume (1)
The Impact of Ndufs4 Knockout Mutations on Neuronal Excitability in a Mouse Model of Ndufs4 Related Leigh Syndromeclose

Leigh syndrome (LS) is a progressive neurological disorder which often manifests within the first year of life and is characterized by the gradual loss of mental and movement abilities accompanied by epilepsy. LS has been associated with loss-of-function (LOF) mutations in genes that encode for proteins present in complex 1 of the electron transport chain. LOF mutations in one such gene, NADH dehydrogenase (ubiquinone) iron sulfur protein 4 (Ndufs4), are strongly associated with LS. Mice carrying a deletion of this gene exhibit symptoms similar to those found in humans, creating a relevant mouse model of LS. In this study, we investigated the effects of an Ndufs4 knockout on the neuronal excitability of both inhibitory and excitatory neurons located in different regions of the brain in LS mouse models. Two LS mouse models were generated by knocking out Ndufs4 in inhibitory or excitatory neurons utilizing LoxP/Cre technology. Mice carrying floxed alleles of Ndufs4 were crossed with VglutCre or GadCre driver mice. The progeny with excitatory or inhibitory neuron-specific Ndufs4 knockout and their control littermates obtained were perfused with phosphate buffered saline (PBS), then fixed with 4% paraformaldehyde (PFA). Brains from these mice were sliced and stained with c-Fos immunocytochemistry, then imaged to quantify neuronal activity. We hypothesize that neuronal excitability in both inhibitory and excitatory neurons will decrease after the Ndufs4 knockout, as mitochondrial defects would reduce the activity of both subsets of neurons. Findings from this study will potentially help understand the mechanisms for development of seizures in LS.


Lightning Talk Presentation 2

10:05 AM to 10:55 AM
Cell-specific Circadian Disturbances in a Mouse Model of Ndufs4-Related Leigh Syndrome
Presenter
  • Elizabeth Grace Chen, Senior, Biochemistry
Mentor
  • Franck Kalume, Neurological Surgery, UW/ Seattle Children's
Session
    Session T-2G: Neuroscience 2
  • 10:05 AM to 10:55 AM

  • Other students mentored by Franck Kalume (1)
Cell-specific Circadian Disturbances in a Mouse Model of Ndufs4-Related Leigh Syndromeclose

Leigh Syndrome (LS) is the most common pediatric mitochondrial disease, and it is associated with loss-of function mutations in genes that encode for proteins in Complex I of the electron transport chain. Mutations in a gene called NADH dehydrogenase (ubiquinone) iron sulfur protein 4 (NDUFS4) is linked with LS which results in many neurological symptoms and neurodegenerative biomarkers in afflicted patients. Prior studies have discovered that many neurodegenerative diseases are characterized by disturbances in circadian function, which can impact disease symptoms and worsen quality of life. However, it remains unknown if disruptions of circadian function are a characteristic phenotype of all mitochondrial diseases and Leigh Syndrome in particular. In this study, we investigated the integrity of the circadian rhythm in conditional knockout (KO)-models of LS. KO-models carried the mutation in either excitatory (glutamatergic) or inhibitory (GABAergic) neurons. We generated mice with Ndufs4 KO restricted to glutamatergic or GABAergic neurons using LoxP Cre technology. To examine circadian rhythm patterns, we placed each mouse in an individual cage with a running wheel and infrared (IR) sensor. Mice were maintained on a 12:12 hour light-dark schedule where the light period began at 7:00 AM. Mouse wheel activity and home cage locomotor activity were recorded and subsequently analyzed offline using ClockLab Analysis. Our initial results showed that Ndufs4 KO in excitatory neurons leads to severe disruption of circadian rhythms in which locomotive activity was not synchronized with a light-dark cycle, whereas Ndufs4 KO in inhibitory neurons had no detectable effect on circadian rhythm. These results reveal that disruptions in circadian function are present in Ndufs4-related LS, particularly due to excitatory neurons. A better understanding of circadian rhythm disruptions in LS can lead to further research on a molecular level to discover underlying characteristics of LS and become an identifier for the progression of LS.


Lightning Talk Presentation 3

11:00 AM to 11:50 AM
Development of a Dataset for Validation of a Novel Mobile Technology That Assesses Traumatic Brain Injury
Presenter
  • Anthony J Maxin, Senior, Biochemistry
Mentors
  • Michael Levitt, Mechanical Engineering, Neurological Surgery, Radiology
  • Cory Kelly, Neurological Surgery
  • Lynn McGrath, Neurosurgery, Weill Cornell Medicine
Session
    Session T-3E: Health, Medicine, and Clinical Care 3
  • 11:00 AM to 11:50 AM

  • Other Neurological Surgery mentored projects (4)
Development of a Dataset for Validation of a Novel Mobile Technology That Assesses Traumatic Brain Injuryclose

The pupillary light reflex (PLR) curve is an important point-of-care biomarker for the diagnosis of traumatic brain injury (TBI). Using PLR, first responders can determine the severity of TBI in the field and direct patients to a trauma center where staff can continually assess PLR to monitor TBI severity. Manual pupillometry, the most commonly available method for first responders and most clinicians wishing to assess PLR, is qualitative and often inaccurate. The current gold-standard device for PLR measurement is digital infrared pupillometry, but such devices are fragile and expensive. Our research team has developed a smartphone-based pupillometer (PupilScreen) with the ability to assess PLR using a standard iPhone, assisted by a cloud-based neural network. To demonstrate the feasibility of using PupilScreen in a realistic clinical setting and compare the accuracy of the device to the current clinical gold-standard, we have built an annotated dataset of the PLR in n=120 patients with TBI who are hospitalized in a neurological intensive care unit. Pupillometry is performed using the mobile device and the gold-standard digital infrared pupillometer. Pupil videos are manually annotated and used in the further training of our machine learning algorithm that generates a PLR curve for each patient. We anticipate that our technology will demonstrate accuracy in assessing the PLR that exceeds that of manual pupillometry and is at least equivalent to the gold-standard digital pupillometer. This technology has the potential to alleviate the current undertreatment of many TBI patients in the United States and abroad that results from a lack of accurate and cost-effective pupillometry equipment.


Lightning Talk Presentation 5

1:20 PM to 2:10 PM
Examining the Potential Use of Focused Ultrasound as a Treatment for Congenital Toxoplasma gondii
Presenter
  • Annika Sahota, Senior, Biochemistry, Microbiology
Mentors
  • Pierre Mourad, Neurological Surgery
  • Sean Murphy, Laboratory Medicine
Session
    Session T-5F: Clinical Sciences & Neuroscience
  • 1:20 PM to 2:10 PM

  • Other Neurological Surgery mentored projects (4)
  • Other students mentored by Sean Murphy (1)
Examining the Potential Use of Focused Ultrasound as a Treatment for Congenital Toxoplasma gondiiclose

Toxoplasma gondii is a prevalent parasitic infection capable of vertical transmission. This particular pathogen is able to infiltrate the placenta, and subsequently cause detrimental cognitive deformities in the growing fetus. Significant factors influencing deviation from typical fetal growth are 1) the pathogenic strain and 2) gestational age at the time of infection. Through this review I will first explore how immune responses vary in relation to the previously stated factors. Then I will evaluate the potential use of focused ultrasound application to stimulate the required immune response to treat Toxoplasma gondii infections in utero. Please note that currently, all results and conclusions are theoretical. Given the adverse effects administration of antiparasitic drugs may have on a growing fetus in terms of toxicity and resistance, the aim is to explore methods which may be capable of improving treatment of vertically transmitted Toxoplasma gondii, as well as other notable in utero infections.


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